The secretome of Wallemia ichthyophaga. (#215)
The
subphylum Wallemiomycetes contains
three species distinguished by both genetic and morphological characteristics: W. ichthyophaga, W. sebi and W. muriae1. These species have been isolated
from environments with low water availability and are considered to be the most
xerophilic and halophilic fungi isolated to date2. W.
ichthyophaga requires at least 10% NaCl to grow and thrives in saturated
salt media. We isolated a strain of W.
ichthyophaga from salted sheep pelts,
which were subsequently dewooled in water without any noticeable skin
damage.
We hypothesised that enzyme(s) secreted by the fungus might be
facilitating the dewooling process, and so began to investigate the secretome
of the sheep pelt isolate. We undertook
a geLC-MSMS approach to identify the proteins secreted by the organism after
two months growth in Wilson’s media containing 20% NaCl. Clarified culture medium was concentrated and
desalted by ultrafiltration. Six
separate samples were analysed; three technical replicates of two biological
replicates, and positive identifications were made only when stringent criteria
were met. This resulted in the identification of only 22 unique secreted proteins
which was less than expected, as during the secretome analysis, the genome of Wallemia ichthyophaga EXF-994 was
published and is predicted to encode 152 “highly likely secreted” proteins. We
therefore repeated the experiment without pre-fractionation (i.e. using LC-MSMS
on the trypsinised desalted concentrated secretome), and these results will be
reported. One of the identified glucosidases
was further purified using IEC and SEC, and characterised. The enzyme was shown
to be N-glycosylated, was most active at 10% NaCl, and interestingly, appeared
to be able to hydrolyse both beta-(1,4) and alpha-(1,4) linkages.
References.
1. Zalar, P., de Hoog, G.S., Schroers, H., Frank, J.M., & Gunde-Cimerman N. (2005). Leeuwenhoek International Journal of General and Molecular Microbiology, 87, 311-328.
2. Zajc, J., Liu, Y., Dai, W., Yang, Z., Hu, J., Gostincar, C. & Gunde-Cimerman N. (2013). BMC Genomics, 14, 1-21.
References.
1. Zalar, P., de Hoog, G.S., Schroers, H., Frank, J.M., & Gunde-Cimerman N. (2005). Leeuwenhoek International Journal of General and Molecular Microbiology, 87, 311-328.
2. Zajc, J., Liu, Y., Dai, W., Yang, Z., Hu, J., Gostincar, C. & Gunde-Cimerman N. (2013). BMC Genomics, 14, 1-21.